Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015884879.1_cds_XP_016438987.1_34591
CDS Infomation

[gene=LOC107764918] [db_xref=GeneID:107764918] [protein=patatin-like protein 3] [protein_id=XP_016438987.1] [location=join(87980..88165,88710..88891,89076..89259,89483..89644,90661..90960,91814..92038)] [gbkey=CDS]
Sequence

ATGGGGAGGTTAAATTTCTTAGTTTCACTAACTCTGTTAGTGACTCTTCAAGTTCTACAA
CCTCCAATATTTGTTTTTGCTGCTACCAAAGGAAAGAATTTTATAACAGTTTTGAGTATT
GATGGAGGTGGAATCAGAGGCATTATTCCAGGAACCATTCTTGCCTTTCTTGAATCCAAG
ATTCAGGAGCTTGATGGACCAAATGCAAGGATTATAGACTATTTTGATGTGGTAGCAGGA
ACAAGCACAGGTGGATTAATTACTATTATGATCACAGCTCCAAACAGAGATAATCGCCCT
TTATATGCAGCTAAAGATATTTCCAGCTTCTACATGGAACACTGCCCTCACATCTTTCCC
GCAAGCCGCCGCAACAGCTTCGTGAATAGGATATTCAATTTTTTTGGAGGACCAAAGTAC
GATGGAAAGTACTTAAGATTATTGGTTGAATCAATATTAGGCAACCTTACTATGAAGCAG
ACATTGACTCATACAGTCATCCCTGCTTTTGATATTAAGCGCCTTCAACCAATTATCTTC
ACCACTGTTGATGCCAGAGCAAATGTGTCTAAGAATGTTTTATTATCAGACATCTCCCTC
AGTACCTCCGCAGCACCCACCTTCTTTCCGGTACACTATTTTGAGAGCAGGGATGCTCAA
GGGAGAATACGCAGATTTGATATGATTGATGGAGGTGTAGCTGCAAATAATCCAACCCAA
ATGGCAATTACACACATTTCAAAAGAAATCATGAGGGGCAAATTTCAGTATGAGGAGATG
GAAACAATGGACAACAAGAAGATGTTGGTTCTATCATTAGGCACAGGTATTGGCAAGCAC
CAAGGGTATAACGCAGCCTCAGCTTCAAAATGGGGTTTACTTGGTTGGGTTTACAACAAT
GGTCAGACCCCAATATTAGATGTTTATAATGATGCAAGTGCTGATATGGTGGATATACAT
GTTTCGACTATGTTTCAGACACTTCGCACTGAAAAGAATTACCTCAGAATTCAGGAGGAT
AATTTGATAGGGGATGCTGCATCAATGGATATAGCAACCACAAAAAATATGCAGAAACTG
GTGCAGATTGGTAACAATCTATTGAAGAAGCCAGTGTCAAGGGTCAATTTGGAGACAGGC
CAATATGAACCAGTTCAAGGGGAAGGCACAAATGAAGAAGCTCTAATCCATTTTGCTAAG
TTGCTTTCACAAGAAAAGAAGCTTCGATACACCAACTGA

Peptide Sequence

PEP ID

XP_016438987.1
PEP Infomation

PREDICTED: patatin-like protein 3 [Nicotiana tabacum]
Sequence

MGRLNFLVSLTLLVTLQVLQPPIFVFAATKGKNFITVLSIDGGGIRGIIPGTILAFLESK
IQELDGPNARIIDYFDVVAGTSTGGLITIMITAPNRDNRPLYAAKDISSFYMEHCPHIFP
ASRRNSFVNRIFNFFGGPKYDGKYLRLLVESILGNLTMKQTLTHTVIPAFDIKRLQPIIF
TTVDARANVSKNVLLSDISLSTSAAPTFFPVHYFESRDAQGRIRRFDMIDGGVAANNPTQ
MAITHISKEIMRGKFQYEEMETMDNKKMLVLSLGTGIGKHQGYNAASASKWGLLGWVYNN
GQTPILDVYNDASADMVDIHVSTMFQTLRTEKNYLRIQEDNLIGDAASMDIATTKNMQKL
VQIGNNLLKKPVSRVNLETGQYEPVQGEGTNEEALIHFAKLLSQEKKLRYTN

Transcript Sequence

Gene sequence data has not been registered.